Analysis of microarray data
Connect to Rstudio server of the IFB
Look at the tutorial on how to connect to IFB-core Rstudio server to see how to proceed.
Save the working notebook in your personal environment
- In "File > Open File..." enter the path
/shared/projects/2319_ens_hts/data/microarrays/Microarrays.Rmdto open the notebook containing all the code needed for the practical.
2. Save it into your personal folder on your IFB account using "File > Save As" with the following path /shared/ifbstor1/home/your_login
Follow the instruction of the notebook to conduct the analysis
You can also visualize the final report version.
You can find help on how to use R markdown on the R markdown project webpage.